Media 000668600: Whole Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
MCZ:Ich:13203 Aphia minuta
Managed by
Meaghan Sorce

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Media produced from the same original imaging that created Media 000668600 (this media). Includes all media associated with this media through an imaging and processing workflow.

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GENERAL DETAILS Field Definitions

Media ID
000668600
Media type
Volumetric Image Series
Object element or part
Whole body
Object represented
MCZ:Ich:13203
Object taxonomy
Aphia minuta
Object organization
MCZ Ichthyology
Side
--
Orientation
--
Short description
--
Full description
--
Creator
Diego F. B Vaz
Date created
July 05, 2021
Date uploaded
October 04, 2024

FILE OBJECT DETAILS Field Definitions

File name
MCZ13203_Aphia_minuta_recon.zip
File format(s)
ZIP archive, TIFF
File size
4.66 GB
Image width
2240
Image height
2240
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
5.765729
Y pixel spacing
5.765729
Z pixel spacing
5.765729
Pixel spacing units
Um
Slice thickness
--
Number of images in set
22

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (1 step)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1173, Museum of Comparative Zoology Scanning Facility (Harvard University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Meaghan Sorce
Data uploaded by
Meaghan Sorce
Publication status
Restricted Download
Download reviewer
Andrew Williston
IP holder
President and Fellows of Harvard College (Copyright and License)
Copyright statement
 In Copyright
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
 https://mcz.harvard.edu/permissions-copyright

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/668600
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object MCZ:Ich:13203 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Museum of Comparative Zoology Scanning Facility (Harvard University)
Creator
Diego F. B. Vaz
Event date
July 05, 2021
Software
1.7
Description
CT scan of MCZ 13203m Aphia minuta
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
3750 ms
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
30 kV
Power
--
Amperage
150 uA
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 1 activity to create derived Media 000668600: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Diego F. B Vaz
Event date
July 05, 2021
Software
NRecon
Description
--
Description attachment
None

Processing Activity 1:

Software
NRecon
Description

Media produced by this event on MorphoSource

Media 000668600: Whole Body [CTImageSeries] [CT] (this media)