Media 000671074: Etheostoma sagitta diceCT head
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UMMZ:ummz_fish:144492 Etheostoma sagitta
Managed by
Jessica Arbour

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Related Media (1)

Media produced from the same original imaging that created Media 000671074 (this media). Includes all media associated with this media through an imaging and processing workflow.

Child Media (1)

Derived media that were created from processing Media 000671074 (this media). The media immediately below this media in the imaging and processing workflow.

Mesh
· Restricted Download

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GENERAL DETAILS Field Definitions

Media ID
000671074
Media type
Volumetric Image Series
Object element or part
Head
Object represented
UMMZ:ummz_fish:144492
Object taxonomy
Etheostoma sagitta
Object organization
Museum of Zoology, Division of Fishes
Side
--
Orientation
--
Short description
--
Full description
--
Creator
Jessica Arbour
Date created
--
Date uploaded
October 12, 2024

FILE OBJECT DETAILS Field Definitions

File name
stack.zip
File format(s)
ZIP archive, BMP
File size
273 MB
Image width
706
Image height
706
Color space
--
Color depth
24
Compression
BI_RGB; None; 0
Series type
Reconstructed image stack
X pixel spacing
17.200000
Y pixel spacing
17.200000
Z pixel spacing
17.200000
Pixel spacing units
Um
Slice thickness
--
Number of images in set
1,218

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco uCT50, Center for Small Animal Imaging (Vanderbilt University Institute of Imaging Science)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Jessica Arbour
Data uploaded by
Jessica Arbour
Publication status
Restricted Download
Download reviewer
--
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
Agreement File

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/671074
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UMMZ:ummz_fish:144492 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Center for Small Animal Imaging (Vanderbilt University Institute of Imaging Science)
Creator
J. Arbour
Event date
--
Software
Scanco
Description
diceCT scan of cranial musculature (1% Lugol's iodine)
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
55kV
Power
--
Amperage
200uA
Surrounding material
Plastic Film
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000671074: Etheostoma sagitta diceCT head (this media).

Processing Details Field Definitions

Creator
Jessica Arbour
Event date
--
Software
Scanco
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000671074: Etheostoma sagitta diceCT head (this media)