Media 000672304: Percina squamata skull and cranial muscle models
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
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GENERAL DETAILS Field Definitions

Media ID
000672304
Media type
Mesh
Object element or part
--
Object represented
Object taxonomy
Percina squamata
Side
--
Orientation
--
Short description
--
Full description
--
Creator
--
Date created
October 20, 2024
Date uploaded
October 20, 2024

FILE OBJECT DETAILS Field Definitions

File name
percina_squamata_for_morphosource.zip
File format(s)
ZIP archive, OBJ
File size
92.5 MB
Points
54201
Polygons
108394
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
4.581, 9.428, 5.121
Centroid coordinates
5.110, 19.664, 15.472 (Vertex Mean)
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (4 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco uCT50, Center for Small Animal Imaging (Vanderbilt University Institute of Imaging Science)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
--
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DEB-2135927; MTSU ORSP
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UMMZ:ummz_fish:171253 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Center for Small Animal Imaging (Vanderbilt University Institute of Imaging Science)
Creator
J. Arbour
Event date
--
Software
Scanco
Description
diceCT scan of cranial musculature (1% Lugol's iodine)
Description attachment
None
Reference attachment
None
Filter
Al 0.5mm
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
55kV
Power
--
Amperage
200uA
Surrounding material
Plastic Film
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000671157: Percina Squamata Dice Ct Head.

Processing Details Field Definitions

Creator
Jessica Arbour
Event date
--
Software
Scanco
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000671157: Percina Squamata Dice Ct Head was processed with 4 activities to create derived Media 000672304: Percina squamata skull and cranial muscle models (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Processing Activity 1: Transform: Rotation

Software
Mimics
Description

Processing Activity 2: Background Removal and/or Masking

Software
Mimics
Description

Processing Activity 3: Reconstructed Tomography to Mesh

Software
Mimics
Description

Processing Activity 4: Smoothing/Noise Reduction

Software
Geomagic Wrap
Description

Media produced by this event on MorphoSource

Media 000672304: Percina squamata skull and cranial muscle models (this media)