Media 000673700: Whole Body
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

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Team
· Public

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GENERAL DETAILS Field Definitions

Media ID
000673700
Media type
Volumetric Image Series
Object element or part
WholeBody
Object represented
Object taxonomy
Blarina brevicauda
Side
--
Orientation
--
Short description
micro-CT data - cross sectional images, reconstructed
Full description
Computed tomography voxel dataset for ummz:mammals:166890-Blarina brevicauda kirtlandi-WholeBody-DiceCT; Full CT Image Series avaliable at https://deepblue.lib.umich.edu/data/concern/data_sets/3j333324n Record created by batch submission.
Creator
Ramon Nagesan
Date created
--
Date uploaded
October 23, 2024

FILE OBJECT DETAILS Field Definitions

File origin
Remote
File name
wp988k79c
File format(s)
TIFF
File size
1.25 MB
Image width
771
Image height
848
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
771.000000
Y pixel spacing
848.000000
Z pixel spacing
1930.000000
Pixel spacing units
Mm
Slice thickness
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, University of Michigan Museum of Zoology, Research Museums Center (University of Michigan)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
University of Michigan Museum of Zoology (Copyright and License)
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
doi:10.7302/dsce-8s76

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object ummz:mammals:166890 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
University of Michigan Museum of Zoology, Research Museums Center (University of Michigan)
Creator
--
Event date
March 08, 2021
Software
Xtek 5.4
Description
--
Description attachment
None
Reference attachment
None
Filter
no
Exposure time
250
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
2
Projections
1601
Voltage
100
Power
--
Amperage
200
Surrounding material
--
X-ray tube type
tungsten
Target type
Reflection
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000673694: Whole Body [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000673694: Whole Body [CTImageSeries] [CT] was processed to create derived Media 000673700: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000673700: Whole Body [CTImageSeries] [CT] (this media)