Media 000543115: Occipital
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
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Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000543115
Media type
Mesh
Object element or part
occipital
Object represented
Object taxonomy
Vintana sertichi
Side
Midline
Orientation
--
Short description
occipital
Creator
Holloway, Waymon
Date created
July 17, 2023
Date uploaded
July 19, 2023

FILE OBJECT DETAILS Field Definitions

File name
UA_9972_occipital.ply
File format(s)
PLY
File size
71.3 MB
Points
983488
Polygons
1972292
Map type
Normal
UV coordinates
False
Vertex color
False
Bounding box dimensions
30.248, 23.255, 29.661
Centroid coordinates
46.246, 69.925, 27.739
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Avonix Imaging (Avonix Imaging)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
O'Connor, Patrick
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Prohibited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF EAR_1123642; NSF EAR_9418816; Ohio University Heritage College of Osteopathic Medicine; NSF DBI_2242717; NGS 8597-09
Publisher
O'Connor, Patrick; Mahajanga Basin Project
Cite as
Patrick M. O'Connor and colleagues provided access to these data originally published in Nature (https://www.nature.com/articles/s41586-020-2945-x) with data collection, processing, and dissemination funded by NSF EAR-0446488, NSF EAR-1123642, NSF DBI_2242717, NGS 8597-09, and Ohio University Heritage College of Osteopathic Medicine. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object ua:9972 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Avonix Imaging (Avonix Imaging)
Creator
Diehm, Jeffery; Reuther, Brian
Event date
November 12, 2012
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
225
Power
--
Amperage
35
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000544424: Cranium [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Groenke, Joseph
Event date
July 21, 2023
Software
Avizo
Description
zipped dicom output from Avizo volume file
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000544424: Cranium [CTImageSeries] [CT] was processed to create derived Media 000543115: Occipital [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Holloway, Waymon
Event date
July 17, 2023
Software
Avizo
Description
export ply format from isosurface rendering or segmentation
Description attachment
None

Media produced by this event on MorphoSource

Media 000543115: Occipital [Mesh] [CT] (this media)