Media 000603956: 8th Cervical Vertebra
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
FMNH:PR:2141 Masiakasaurus knopfleri
Managed by
Sharon Grant

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Media Display

Related Media (1)

Media produced from the same original imaging that created Media 000603956 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000603956 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

In Collections

Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000603956
Media type
Mesh
Object element or part
8th cervical vertebra
Object represented
FMNH:PR:2141
Object taxonomy
Masiakasaurus knopfleri
Object organization
Field Museum of Natural History (Geology) Fossil Herps Collection
Side
Midline
Orientation
--
Short description
8th cervical vertebra
Full description
--
Creator
McDiarmid, Fisher
Date created
January 18, 2024
Date uploaded
February 12, 2024

FILE OBJECT DETAILS Field Definitions

File name
FMNH_PR_2141.ply
File format(s)
PLY
File size
240 MB
Points
3120787
Polygons
6282058
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
27.312, 33.573, 34.658
Centroid coordinates
30.235, 31.672, 17.451
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000603946: 8th Cervical Vertebra [CTImageSeries] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric eXplore CT 120 in vivo, Ohio University MicroCT Facility (Ohio University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Sharon Grant
Data uploaded by
Fisher McDiarmid
Publication status
Restricted Download
Download reviewer
Kate Webbink; William Simpson; Sharon Grant; Patrick OConnor
IP holder
Field Museum of Natural History
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF EAR_9418817; NSF EAR_1525915; NSF EAR_1123642; NSF DBI_2242718; Ohio University Heritage College of Osteopathic Medicine
Publisher
O'Connor, Patrick; Mahajanga Basin Project
Cite as
Patrick M. O'Connor and colleagues provided access to these data. Data collection and processing funded by the US NSF EAR_9418816, NSF EAR_1123642, NSF EAR_1525915, NSF DBI_2242717 and Ohio University Heritage College of Osteopathic Medicine. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
 https://www.fieldmuseum.org/science/research/use-collections-data-and-images

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/603956
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object FMNH:PR:2141 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Ohio University MicroCT Facility (Ohio University)
Creator
Ridgely, Ryan; Witmer, Larry
Event date
December 15, 2023
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
20ms
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
4
Projections
--
Voltage
120kV
Power
--
Amperage
32mA
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000603946: 8th Cervical Vertebra [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
McDiarmid, Fisher
Event date
January 18, 2024
Software
Avizo
Description
Cropping and output as dicoms to replace field number(s) with museum accession number.
Description attachment
None

Media produced by this event on MorphoSource

Media 000603946: 8th Cervical Vertebra [CTImageSeries] [CT]

STEP 3: IMAGE PROCESSING

Derived Media 000603946: 8th Cervical Vertebra [CTImageSeries] [CT] was processed to create derived Media 000603956: 8th Cervical Vertebra [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
McDiarmid, Fisher
Event date
January 18, 2024
Software
Avizo
Description
Cropping and output as dicoms to replace field number(s) with museum accession number.
Description attachment
None

Media produced by this event on MorphoSource

Media 000603956: 8th Cervical Vertebra [Mesh] [CT] (this media)