Media 000381617: Whole Body
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
l-ap:Fb103.2 Sminthopsis crassicaudata
Managed by
Laura Cook

Download Add to Cart

Login or create an account to download files

Media Display

Related Media (0)

Media produced from the same original imaging that created Media 000381617 (this media). Includes all media associated with this media through an imaging and processing workflow.

No related media found.

In Collections

No collections found.

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000381617
Media type
Volumetric Image Series
Object element or part
Whole body
Object represented
l-ap:Fb103.2
Object taxonomy
Sminthopsis crassicaudata
Object organization
Laboratory of Andrew Pask
Side
--
Orientation
--
Short description
--
Full description
Cook, L. E., Newton, A. H., Hipsley, C. A. & Pask, A. J. (2021) Postnatal development in a marsupial model, the fat-tailed dunnart (Sminthopsis crassicaudata; Dasyuromorphia: Dasuryidae). Communications Biology. 10.1038/s42003-021-02506-2
Creator
Newton, Axel; Cook, Laura; Hipsley, Christy
Date created
October 29, 2018
Date uploaded
September 02, 2021

FILE OBJECT DETAILS Field Definitions

File name
D35_tiffs.zip
File format(s)
ZIP archive, TIFF
File size
1.11 GB
Image width
985
Image height
2130
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.010667
Y pixel spacing
0.010667
Z pixel spacing
0.010667
Pixel spacing units
--
Slice thickness
--
Number of images in set
1,083

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix nanotom m, Melbourne Trace Analysis for Chemical, Earth and Environmental Sciences (TrACEES) Platform (University of Melbourne)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Laura Cook
Data uploaded by
Laura Cook
Publication status
Open Download
Download reviewer
Laura Cook
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
DE180100629; DP160103683
Publisher
Laboratory of Andrew Pask
Cite as
Cook, L. E., Newton, A. H., Hipsley, C. A. & Pask, A. J. (2021) Postnatal development in a marsupial model, the fat-tailed dunnart (Sminthopsis crassicaudata; Dasyuromorphia: Dasuryidae). Communications Biology. 10.1038/s42003-021-02506-2
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/381617
MorphoSource DOI
Not assigned
External identifier
https://doi.org/10.1038/s42003-021-02506-2
External media URL
https://doi.org/10.6084/m9.figshare.14705202

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object l-ap:Fb103.2 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Melbourne Trace Analysis for Chemical, Earth and Environmental Sciences (TrACEES) Platform (University of Melbourne)
Creator
Cook, Laura
Event date
October 29, 2018
Software
--
Description
Cook, L. E., Newton, A. H., Hipsley, C. A. & Pask, A. J. (2021) Postnatal development in a marsupial model, the fat-tailed dunnart (Sminthopsis crassicaudata; Dasyuromorphia: Dasuryidae). Communications Biology. 10.1038/s42003-021-02506-2
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
1199 2D x-ray projections
Voltage
45
Power
--
Amperage
300
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000381617: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Cook, Laura, Newton, Axel, Hipsley, Christy
Event date
October 29, 2018
Software
VGSTUDIO
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000381617: Whole Body [CTImageSeries] [CT] (this media)