Media 000624699: Head
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
cumv:bird:51246 Campephilus sp.
Managed by
Theresa De Cree

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Media produced from the same original imaging that created Media 000624699 (this media). Includes all media associated with this media through an imaging and processing workflow.

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GENERAL DETAILS Field Definitions

Media ID
000624699
Media type
Volumetric Image Series
Object element or part
head
Object represented
cumv:bird:51246
Object taxonomy
Campephilus sp.
Object organization
Museum of Vertebrates, Bird Collection
Side
--
Orientation
--
Short description
HRXCT scan- head
Full description
University of Texas High-Resolution X-ray CT Facility Archive 1228 Rowe: Campephilus: Scans of the head of a mounted Campephilus principalis (CU 51246) for Dr. Timothy Rowe of the Department of Geological Sciences, The University of Texas at Austin. Specimen scanned by Matthew Colbert 3 May 2005. 16bit: 1024x1024 16-bit TIFF images, RLS, 180 kV, 0.133 mA, no filter, empty container wedge, 190% offset, gain 4, integration time 32 ms, slice thickness 0.25 mm, S.O.D. 752 mm. 1000 views, 1 ray per view, 1 sample per view, inter-slice spacing 0.2 mm, field of reconstruction 152 mm (maximum field of view 152.1198 mm), reconstruction offset 5000, scanner scale 500000, reconstruction scale 1670. Ring-removal processing done by Susan Garlock using IDL routine “RK_SinoRingProcSimul” with parameter “binwidth-21.” Reconstructed with reconstruction angle 173 degrees. Total slices 339.
Creator
Matthew Colbert
Date created
May 03, 2005
Date uploaded
April 30, 2024

FILE OBJECT DETAILS Field Definitions

File name
16bit.zip
File format(s)
ZIP archive, TIFF
File size
163 MB
Image width
308
Image height
976
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.150000
Y pixel spacing
0.150000
Z pixel spacing
0.200000
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
339

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS scanner with GE Titan X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Theresa De Cree
Data uploaded by
Theresa De Cree
Publication status
Restricted Download
Download reviewer
Casey Dillman; Jessie Maisano
IP holder
Cornell University
Copyright statement
 In Copyright - Non-Commercial Use Permitted
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
DBI-1902242, IIS-0208675
Publisher
oUTCT PEN
Cite as
Funding for scanning was provided by NSF grant IIS-0208675 to Tim Rowe. Data upload to MorphoSource was funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/624699
MorphoSource DOI
Not assigned
External identifier
--
External media URL
https://digimorph.org/specimens/Campephilus_principalis/CU51246/

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object cumv:bird:51246 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
--
Event date
May 03, 2005
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
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Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
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Voltage
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Power
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Amperage
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Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000624699: Head [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000624699: Head [CTImageSeries] [CT] (this media)