Media 000003721: Astragalus
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
AMNH:Mammals:M-150038 Loris tardigradus
Managed by
AMNH Mammalogy Department

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Related Media (2)

Media produced from the same original imaging that created Media 000003721 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000003721 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Open Download

Other Related Media (1)

Other media associated with the original imaging that produced Media 000003721 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
· Open Download

In Collections

Project
· Public
Team
· Public

TAGS

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GENERAL DETAILS Field Definitions

Media ID
000003721
Media type
Mesh
Object element or part
Astragalus
Object represented
AMNH:Mammals:M-150038
Object taxonomy
Loris tardigradus
Object organization
AMNH Mammal Collections
Side
Left
Orientation
--
Short description
Smooth Surface Mesh
Full description
Migrated MorphoSource 1 Media File Title: Smooth Surface Mesh Migrated MorphoSource 1 Media Group Title: Zipped Tiff Stack Migrated MorphoSource 1 Media File Description: Scale bar = 6.00mm
Creator
--
Date created
--
Date uploaded
November 05, 2014

FILE OBJECT DETAILS Field Definitions

File name
AMNH_150038_Loris_tardigradus_astL_smooth.ply
File format(s)
PLY
File size
26.8 MB
Points
374916
Polygons
749984
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
6.129, 4.516, 8.188
Centroid coordinates
3.959, 2.290, 6.052
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000003714: Astragalus [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical µCT 40, Stony Brook University Center for Biotechnology (Stony Brook University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
AMNH Mammalogy Department
Data uploaded by
Ksenia Sokolova
Publication status
Open Download
Download reviewer
AMNH Mammalogy Department
IP holder
AMNH Dept of Mammalogy
Copyright statement
 Copyright Undetermined
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1317525
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Doug Boyer provided access to these dataoriginally appearing in Boyer and Seiffert (2013) NSF BCS 1317525. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M3721
MorphoSource DOI
 doi:10.17602/M2/M3721
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object AMNH:Mammals:M-150038 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Stony Brook University Center for Biotechnology (Stony Brook University)
Creator
Doug Boyer, Ksenia Sokolova
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000003714: Astragalus [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Doug Boyer, Ksenia Sokolova
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000003714: Astragalus [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000003714: Astragalus [CTImageSeries] [Etc] was processed to create derived Media 000003721: Astragalus [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Doug Boyer, Ksenia Sokolova
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000003721: Astragalus [Mesh] [Etc] (this media)