Media 000417780: Distal Phalanx 5 (Dp5)
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
ummp:vp:101963 Carpolestes simpsoni
Managed by
Douglas Boyer

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Media Display

Related Media (1)

Media produced from the same original imaging that created Media 000417780 (this media). Includes all media associated with this media through an imaging and processing workflow.

Child Media (1)

Derived media that were created from processing Media 000417780 (this media). The media immediately below this media in the imaging and processing workflow.

Mesh
· Restricted Download

In Collections

Project
· Public

TAGS

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GENERAL DETAILS Field Definitions

Media ID
000417780
Media type
Volumetric Image Series
Object element or part
distal phalanx 5 (dp5)
Object represented
ummp:vp:101963
Object taxonomy
Carpolestes simpsoni
Object organization
Museum of Paleontology
Side
--
Orientation
--
Short description
--
Full description
bone #misc1 in original skeleton documentation. ID as shown in Bloch and Boyer 2002
Creator
Gabriel Yapuncich
Date created
January 04, 2018
Date uploaded
January 28, 2022

FILE OBJECT DETAILS Field Definitions

File name
UMMP101963_Csimps_misc1_DP5.zip
File format(s)
ZIP archive, TIFF
File size
11.5 MB
Image width
218
Image height
288
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.010000
Y pixel spacing
0.010000
Z pixel spacing
0.010000
Pixel spacing units
--
Slice thickness
--
Number of images in set
101

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (3 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical µCT 40, Stony Brook University Center for Biotechnology (Stony Brook University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Douglas Boyer
Data uploaded by
Gabriel Yapuncich
Publication status
Restricted Download
Download reviewer
Jonathan Bloch; Douglas Boyer
IP holder
University of Michigan Museum of Paleontology
Copyright statement
 Copyright Undetermined
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1317525 (to DM Boyer and ER Seiffert), 1552848 (to DM Boyer) and Duke University Trinity College of Arts and Sciences
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/417780
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object ummp:vp:101963 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Stony Brook University Center for Biotechnology (Stony Brook University)
Creator
Doug Boyer
Event date
August 25, 2009
Software
scanco medical software
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 3 activities to create derived Media 000417780: Distal Phalanx 5 (Dp5) [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Gabriel Yapuncich
Event date
January 04, 2018
Software
ImageJ
Description
reconstruction done with scanco medical in 2009 from sinograms
Description attachment
None

Processing Activity 1: Reconstruction

Software
scanco medical software
Description

Processing Activity 2: Transform: Rotation

Software
ImageJ
Description

Processing Activity 3: Crop

Software
ImageJ
Description

Media produced by this event on MorphoSource

Media 000417780: Distal Phalanx 5 (Dp5) [CTImageSeries] [CT] (this media)