Media 000005176: First Metatarsal
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UMMP:VP:87990 Plesiadapis cookei
Managed by
Douglas Boyer

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Related Media (1)

Media produced from the same original imaging that created Media 000005176 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000005176 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Open Download

In Collections

Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000005176
Media type
Mesh
Object element or part
first metatarsal
Object represented
UMMP:VP:87990
Object taxonomy
Plesiadapis cookei
Object organization
Museum of Paleontology
Side
Right
Orientation
--
Short description
smooth mesh file
Full description
Migrated MorphoSource 1 Media File Title: smooth mesh file Migrated MorphoSource 1 Media Group Title: smooth mesh file Migrated MorphoSource 1 Media File Description: correct chirality / Boyer and Gingerich (2018: Figure 65A) Migrated MorphoSource 1 Media Group Description: correct chirality / Boyer and Gingerich (2018: Figure 65A)
Creator
--
Date created
--
Date uploaded
March 09, 2015

FILE OBJECT DETAILS Field Definitions

File name
UM87990_p-cookei-mt1-smoothed.ply
File format(s)
PLY
File size
8.51 MB
Points
125004
Polygons
250000
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
8.645, 18.033, 4.856
Centroid coordinates
5.091, 9.636, 5.824
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000005177: First Metatarsal [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical µCT 40, Stony Brook University Center for Biotechnology (Stony Brook University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Douglas Boyer
Data uploaded by
Douglas Boyer
Publication status
Open Download
Download reviewer
--
IP holder
Doug Boyer
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
American Society of Mammalogists Grant Evolving Earth Foundation NSF DDIG BCS-0622544
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Doug Boyer provided access to these dataoriginally appearing in Boyer (2009) American Society of Mammalogists Grant Evolving Earth Foundation NSF DDIG BCS-0622544 to DMB. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
--
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M5176
MorphoSource DOI
 doi:10.17602/M2/M5176
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UMMP:VP:87990 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Stony Brook University Center for Biotechnology (Stony Brook University)
Creator
Doug Boyer
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000005177: First Metatarsal [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Doug Boyer
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000005177: First Metatarsal [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000005177: First Metatarsal [CTImageSeries] [Etc] was processed to create derived Media 000005176: First Metatarsal [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Doug Boyer
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000005176: First Metatarsal [Mesh] [Etc] (this media)