Media 000034575: Distal Phalanx
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UMMP:VP:87990 Plesiadapis cookei
Managed by
Douglas Boyer

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Related Media (2)

Media produced from the same original imaging that created Media 000034575 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top)

The first media in the imaging and processing workflow that produced Media 000034575 (this media). The media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

Parent Media (Direct)

The media that was processed to create Media 000034575 (this media). The media immediately preceding this media in the imaging and processing workflow.

Mesh
· Restricted Download

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Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000034575
Media type
Mesh
Object element or part
Distal phalanx
Object represented
UMMP:VP:87990
Object taxonomy
Plesiadapis cookei
Object organization
Museum of Paleontology
Side
Unknown
Orientation
--
Short description
Smooth surface mesh
Full description
Migrated MorphoSource 1 Media File Title: Smooth surface mesh Migrated MorphoSource 1 Media Group Title: MicroCT Volume & Derivative Mesh Files Migrated MorphoSource 1 Media File Description: Represents Bone D in Figure 54 of Boyer & Gingerich (2018) Migrated MorphoSource 1 Media Group Description: Represents Bone D in Figure 54 of Boyer & Gingerich (2018)
Creator
--
Date created
--
Date uploaded
October 25, 2017

FILE OBJECT DETAILS Field Definitions

File name
bone-8-smooth.ply
File format(s)
PLY
File size
14.1 MB
Points
202032
Polygons
404064
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
3.301, 7.893, 6.758
Centroid coordinates
2.639, 4.731, 5.415
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
2
Number of processing events
3 (0 steps)
Derived directly from
Media 000034574: Distal Phalanx [Mesh] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Scanco Medical vivaCT 75, Stony Brook University Center for Biotechnology (Stony Brook University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Douglas Boyer
Data uploaded by
Barbara Zhao
Publication status
Restricted Download
Download reviewer
--
IP holder
University of Michigan Museum of Paleontology
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF BCS 1440742 (to DM Boyer and GF Gunnell), BCS 1440588 (to JI Bloch), and BCS 1552848 (to DM Boyer)
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Doug Boyer provided access to these data. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M34575
MorphoSource DOI
 doi:10.17602/M2/M34575
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UMMP:VP:87990 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Stony Brook University Center for Biotechnology (Stony Brook University)
Creator
Doug Boyer, Barbara Zhao
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
1
Projections
?
Voltage
?
Power
0.0
Amperage
?
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000034573: Distal Phalanx [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Doug Boyer, Barbara Zhao
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000034573: Distal Phalanx [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Processing Details Field Definitions

Creator
Doug Boyer, Barbara Zhao
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000034574: Distal Phalanx [Mesh] [Etc]

STEP 4: IMAGE PROCESSING

Derived Media 000034574: Distal Phalanx [Mesh] [Etc] was processed to create derived Media 000034575: Distal Phalanx [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Doug Boyer, Barbara Zhao
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000034575: Distal Phalanx [Mesh] [Etc] (this media)