Media 000116308: Brain Endocast
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
USNM:BIRDS:USNM 347603 Spheniscus magellanicus
Managed by
Chris Milensky

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Related Media (3)

Media produced from the same original imaging that created Media 000116308 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000116308 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
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Other Related Media (2)

Other media associated with the original imaging that produced Media 000116308 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
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Image
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GENERAL DETAILS Field Definitions

Media ID
000116308
Media type
Mesh
Object element or part
brain endocast
Object represented
USNM:BIRDS:USNM 347603
Object taxonomy
Spheniscus magellanicus
Object organization
NMNH - Division of Birds
Side
NotApplicable
Orientation
--
Short description
Brain endocast OBJ
Full description
Migrated MorphoSource 1 Media File Title: Brain endocast OBJ Migrated MorphoSource 1 Media Group Title: OBJ
Creator
--
Date created
--
Date uploaded
May 20, 2020

FILE OBJECT DETAILS Field Definitions

File name
USNM_Birds_347603_Spheniscus-magellanicus-endocast.obj
File format(s)
OBJ
File size
21 MB
Points
299909
Polygons
599794
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
37.877, 31.534, 43.944
Centroid coordinates
31.146, -43.142, 41.349
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000029744: Element Unspecified [CTImageSeries] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1173, Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Chris Milensky
Data uploaded by
Catherine Early
Publication status
Restricted Download
Download reviewer
Catherine Early; Chris Milensky
IP holder
Smithsonian Institution, National Museum of Natural History
Copyright statement
 In Copyright - Non-Commercial Use Permitted
Creative Commons license
 Creative Commons BY-NC-SA Attribution-NonCommercial-ShareAlike 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF grants to L. M. Witmer (IOB-0517257, IOS-1050154, IOS-1456503); NSF Graduate Research Fellowship to C. M. Early (DGE-1060934, DGE-1645419); American Museum of Natural History Chapman Ornithology Grant to C. M. Early
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: C. M. Early, A. N. Iwaniuk, R. C. Ridgely, and L. M. Witmer provided access to these dataoriginally appearing in Early et al., 2020, the generation of which was funded by an NSF Graduate Research Fellowship to Catherine M. Early (DGE-1060934, DGE-1645419), American Museum of Natural History Chapman Ornithology Grant to Catherine M. Early, and NSF grants to Lawrence M. Witmer (IOB-0517257, IOS-1050154, IOS-1456503). The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
--
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M116308
MorphoSource DOI
 doi:10.17602/M2/M116308
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object USNM:BIRDS:USNM 347603 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
--
Voltage
65
Power
--
Amperage
123
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000029744: Element Unspecified [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000029744: Element Unspecified [CTImageSeries] [CT]

STEP 3: IMAGE PROCESSING

Derived Media 000029744: Element Unspecified [CTImageSeries] [CT] was processed to create derived Media 000116308: Brain Endocast [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
February 23, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000116308: Brain Endocast [Mesh] [CT] (this media)