Media 000359474: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000359474: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
In Collections
Project
· Public
Project
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000359474
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
Object taxonomy
Dolichonyx oryzivorus
Object organization
Side
--
Orientation
--
Short description
zipped tiff stack
Full description
fluid-preserved bird
Creator
--
Date created
--
Date uploaded
April 22, 2021
FILE OBJECT DETAILS Field Definitions
File name
MVZ_B_174879_Dolichonyx_ImageStack.zip
File format(s)
ZIP archive, TIFF
File size
264 MB
Image width
428
Image height
439
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.076042
Y pixel spacing
0.076042
Z pixel spacing
0.076042
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,902
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s, UChicago PaleoCT (University of Chicago)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Museum of Vertebrate Zoology, UC Berkeley
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
oVert TCN; NSF DBI-1701714; NSF DBI-1701797; NSF DBI-1702421
Publisher
--
Cite as
Museum of Vertebrate Zoology at Berkeley provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
MVZ:Bird:MVZ:Bird:174879
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
UChicago PaleoCT (University of Chicago)
Creator
Coldren, Daryl
Event date
April 12, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.25
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
3
Projections
700
Voltage
110
Power
0.024
Amperage
220
Surrounding material
Air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000359474: Whole Body [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
Baumgart, Stephanie
Event date
April 12, 2021
Software
VGStudio Max 3.3
Description
calibrated histogram to highest and lowest densities, cropped ROI down to the specimen
Description attachment
None