Media 000370146: Complete Skeleton In 4 Slabs
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
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GENERAL DETAILS Field Definitions

Media ID
000370146
Media type
Mesh
Object element or part
Complete Skeleton in 4 slabs
Object represented
Object taxonomy
Tupandactylus navigans
Side
--
Orientation
--
Short description
Complete Tupandactylus navigans specimen, with cranial and post-cranial material, divided into 4 slabs (datasets)
Full description
--
Creator
Beccari, Victor
Date created
July 13, 2021
Date uploaded
July 13, 2021

FILE OBJECT DETAILS Field Definitions

File name
GP.2E_9266_Decimated_Segmentation_Model.obj
File format(s)
OBJ
File size
451 MB
Points
4503
Polygons
9008
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
11.006, 16.101, 12.068
Centroid coordinates
-16.112, -16.728, -71.075
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
1 (2 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Philips Brilliance 64 CT scanner, Hospital Universitário (Universidade de São Paulo)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
10.1371/journal.pone.0254789
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Hospital Universitário (Universidade de São Paulo)
Creator
Nunes, Ivan; Costa, Fabiana Rodrigues; Beccari, Victor; Anelli, Luiz Eduardo; Mateus, Octávio; Pinheiro, Felipe Lima
Event date
--
Software
--
Description
Raw CT-scan of the specimen GP/2E 9266, a complete Tupandactylus navigans, divided into 4 slabs (data sets).
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

Media produced by this event on MorphoSource

STEP 2: IMAGE PROCESSING

Raw Media 000369632: Complete Skeleton In 4 Slabs [CTImageSeries] [CT] was processed with 2 activities to create derived Media 000370146: Complete Skeleton In 4 Slabs [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Beccari, Victor
Event date
July 13, 2021
Software
Avizo; Blender
Description
3D model of the segmentation of specimen GP/2E 9266 (Tupandactylus navigans)
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
Avizo
Description
Surface export after the image segmentation, no smoothing operation was used

Processing Activity 2: Align Parts

Software
Blender
Description
Alignment of all 4 slabs containing the segmented bones

Media produced by this event on MorphoSource

Media 000370146: Complete Skeleton In 4 Slabs [Mesh] [CT] (this media)