Media 000370146: Complete Skeleton In 4 Slabs
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000370146: Complete Skeleton In 4 Slabs
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
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TAGS
GENERAL DETAILS Field Definitions
Media ID
000370146
Media type
Mesh
Object element or part
Complete Skeleton in 4 slabs
Object represented
Object taxonomy
Tupandactylus navigans
Object organization
Side
--
Orientation
--
Short description
Complete Tupandactylus navigans specimen, with cranial and post-cranial material, divided into 4 slabs (datasets)
Full description
--
Creator
Beccari, Victor
Date created
July 13, 2021
Date uploaded
July 13, 2021
FILE OBJECT DETAILS Field Definitions
File name
GP.2E_9266_Decimated_Segmentation_Model.obj
File format(s)
OBJ
File size
451 MB
Points
4503
Polygons
9008
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
11.006, 16.101, 12.068
Centroid coordinates
-16.112, -16.728, -71.075
Units of point coordinates
--
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
1
(2 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Philips Brilliance 64 CT scanner, Hospital Universitário (Universidade de São Paulo)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
10.1371/journal.pone.0254789
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
usp:gp:/2E 9266
was imaged to create
raw
Media 000369632: Complete Skeleton In 4 Slabs [CTImageSeries] [CT].
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Hospital Universitário (Universidade de São Paulo)
Creator
Nunes, Ivan; Costa, Fabiana Rodrigues; Beccari, Victor; Anelli, Luiz Eduardo; Mateus, Octávio; Pinheiro, Felipe Lima
Event date
--
Software
--
Description
Raw CT-scan of the specimen GP/2E 9266, a complete Tupandactylus navigans, divided into 4 slabs (data sets).
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
Media produced by this event on MorphoSource
STEP 2: IMAGE PROCESSING
Raw
Media 000369632: Complete Skeleton In 4 Slabs [CTImageSeries] [CT]
was processed
with 2 activities
to create
derived
Media 000370146: Complete Skeleton In 4 Slabs [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
Beccari, Victor
Event date
July 13, 2021
Software
Avizo; Blender
Description
3D model of the segmentation of specimen GP/2E 9266 (Tupandactylus navigans)
Description attachment
None
Processing Activity 1: Reconstructed Tomography to Mesh
Software
Avizo
Description
Surface export after the image segmentation, no smoothing operation was used
Processing Activity 2: Align Parts
Software
Blender
Description
Alignment of all 4 slabs containing the segmented bones
Media produced by this event on MorphoSource
Media 000370146: Complete Skeleton In 4 Slabs [Mesh] [CT] (this media)