Media 000428548: Lower Molar
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UCMP:V:37534 Pliotomodon primitivus
Managed by
University of California Museum of Paleontology

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Related Media (1)

Media produced from the same original imaging that created Media 000428548 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000428548 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Open Download

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GENERAL DETAILS Field Definitions

Media ID
000428548
Media type
Mesh
Object element or part
lower molar
Object represented
UCMP:V:37534
Object taxonomy
Pliotomodon primitivus
Object organization
University of California Museum of Paleontology
Side
Right
Orientation
--
Short description
--
Full description
--
Creator
Holroyd, Patricia A.
Date created
March 05, 2022
Date uploaded
March 06, 2022

FILE OBJECT DETAILS Field Definitions

File name
37534_reduced.ply
File format(s)
PLY
File size
10.4 MB
Points
279029
Polygons
579375
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
2.977, 3.282, 2.951
Centroid coordinates
-1.452, -1.960, 1.378
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (3 steps)
Derived directly from
Media 000428525: Lower Molar [CTImageSeries] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix nanotom m 180, Functional Anatomy and Vertebrate Evolution Laboratory (University of California Berkeley)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
University of California Museum of Paleontology
Data uploaded by
Patricia Holroyd
Publication status
Open Download
Download reviewer
University of California Museum of Paleontology
IP holder
University of California Regents; University of California Museum of Paleontology
Copyright statement
 Copyright Not Evaluated
Creative Commons license
 Creative Commons BY Attribution 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/428548
MorphoSource DOI
 10.17602/M2/M428548
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UCMP:V:37534 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Functional Anatomy and Vertebrate Evolution Laboratory (University of California Berkeley)
Creator
Holroyd, Patricia A.
Event date
November 09, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 1 activity to create derived Media 000428525: Lower Molar [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Holroyd, Patricia A.
Event date
November 09, 2021
Software
--
Description
--
Description attachment
None

Processing Activity 1: Crop

Software
ImageJ
Description

Media produced by this event on MorphoSource

Media 000428525: Lower Molar [CTImageSeries] [CT]

STEP 3: IMAGE PROCESSING

Derived Media 000428525: Lower Molar [CTImageSeries] [CT] was processed with 2 activities to create derived Media 000428548: Lower Molar [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Holroyd, Patricia A.
Event date
March 05, 2022
Software
--
Description
--
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
3D Slicer
Description

Processing Activity 2: Simplification

Software
Meshlab
Description

Media produced by this event on MorphoSource

Media 000428548: Lower Molar [Mesh] [CT] (this media)