Media 000575526: Quadrate
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
KU:KUI:41641 Sillago sihama
Managed by
Jorgo Ristevski

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Related Media (8)

Media produced from the same original imaging that created Media 000575526 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000575526 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

Other Related Media (7)

Other media associated with the original imaging that produced Media 000575526 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
· Open Download
Mesh
· Open Download
Mesh
· Open Download
Mesh
· Open Download
Mesh
· Open Download
Mesh
· Open Download
Mesh
· Open Download
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GENERAL DETAILS Field Definitions

Media ID
000575526
Media type
Mesh
Object element or part
quadrate
Object represented
KU:KUI:41641
Object taxonomy
Sillago sihama
Object organization
KUBI Ichthyology Collection
Side
Left
Orientation
--
Short description
Left quadrate of Sillago sihama
Full description
There are some gaps in the mesh that could not be filled confidently due to the resolution of the CT scan. Record created by batch submission.
Creator
Ristevski, Jorgo
Date created
--
Date uploaded
October 30, 2023

FILE OBJECT DETAILS Field Definitions

File name
Sillago_sihama_Quadrate.zip
File format(s)
ZIP archive, PLY
File size
543 KB
Points
33776
Polygons
67552
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
78.664, 212.004, 144.639
Centroid coordinates
410.779, 401.423, 243.892
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000473244: Head [CTImageSeries] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Jorgo Ristevski
Data uploaded by
Jorgo Ristevski
Publication status
Open Download
Download reviewer
Andrew Bentley
IP holder
University of Kansas Biodiversity Institute
Copyright statement
 No Copyright - Non-Commercial Use Only
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
ARC Centre of Excellence for Australian Biodiversity and Heritage
Publisher
Fishboneviz
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/575526
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object KU:KUI:41641 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Zach Randall
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
200.098
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
1560
Voltage
90
Power
0.018
Amperage
200
Surrounding material
air
X-ray tube type
--
Target type
Reflection
Detector type
Scintillator (Phosphor used)
Detector pixels X
2024
Detector pixels size X
0.2
Detector pixels Y
2024
Detector pixels size Y
0.2
Detector configuration
Area (single or tiled detector)
Source object distance
160.8768125
Source detector distance
802.77534791
Target material
tungston
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000473244: Head [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Zach Randall
Event date
--
Software
DatosX|R
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000473244: Head [CTImageSeries] [CT]

STEP 3: IMAGE PROCESSING

Derived Media 000473244: Head [CTImageSeries] [CT] was processed to create derived Media 000575526: Quadrate [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Ristevski, Jorgo
Event date
September 26, 2023
Software
DatosX|R
Description
Segmentation
Description attachment
None

Media produced by this event on MorphoSource

Media 000575526: Quadrate [Mesh] [CT] (this media)