Media 000605538: Dice Ct Whole Body
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

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GENERAL DETAILS Field Definitions

Media ID
000605538
Media type
Volumetric Image Series
Object element or part
diceCT whole body
Object represented
Object taxonomy
Terrapene carolina
Side
--
Orientation
--
Short description
stained with 2.5% Lugol's iodine
Full description
Injected with 2.5% buffered Lugol's iodine, while staining in a 1.25% buffered Lugol's iodine bath
Creator
Jaimi Gray
Date created
April 13, 2022
Date uploaded
February 19, 2024

FILE OBJECT DETAILS Field Definitions

File name
UF-herp-181844-diceCT.zip
File format(s)
ZIP archive, TIFF
File size
5.55 GB
Image width
1832
Image height
1238
Color space
BlackIsZero
Color depth
16
Compression
PackBits
Series type
Reconstructed image stack
X pixel spacing
0.060392
Y pixel spacing
0.060392
Z pixel spacing
0.060392
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
2,520

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Open Download
IP holder
Florida Museum of Natural History, University of Florida
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701714 ("oVert: TCN" parent grant)
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UF:Herp:181844 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Jaimi Gray
Event date
April 13, 2022
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
500ms
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
2200
Voltage
170 kV
Power
--
Amperage
200 uA
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000605538: Dice Ct Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi Gray
Event date
April 13, 2022
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000605538: Dice Ct Whole Body [CTImageSeries] [CT] (this media)