Media 000477538: Anal Fin
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000477538: Anal Fin
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
In Collections
Project
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000477538
Media type
Volumetric Image Series
Object element or part
anal fin
Object represented
Object taxonomy
Latimeria chalumnae
Object organization
Side
NotApplicable
Orientation
--
Short description
--
Full description
--
Creator
Zhang, Alice
Date created
October 18, 2022
Date uploaded
October 25, 2022
FILE OBJECT DETAILS Field Definitions
File name
az377_YPM_ICH.001482_anal_fin_01.zip
File format(s)
ZIP archive, TIFF
File size
897 MB
Image width
773
Image height
467
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.122041
Y pixel spacing
0.122041
Z pixel spacing
0.122041
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,999
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(1 step)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Chemical and Biophysical Instrumentation Center (Yale University)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Yale University
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701714; NSF DBI-1701769
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
YPM:VZ:YPM ICH 001482
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Chemical and Biophysical Instrumentation Center (Yale University)
Creator
Zhang, Alice
Event date
October 11, 2022
Software
Inspect-X
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
1
Flux normalization
--
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
3141
Voltage
92
Power
--
Amperage
83
Surrounding material
cheesecloth
X-ray tube type
--
Target type
Reflection
Detector type
--
Detector pixels X
2000
Detector pixels size X
0.2
Detector pixels Y
2000
Detector pixels size Y
0.2
Detector configuration
--
Source object distance
679.844100
Source detector distance
1114.129000
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
Sequenced
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
with 1 activity
to create
derived
Media 000477538: Anal Fin [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
Zhang, Alice
Event date
October 18, 2022
Software
CT Pro
Description
--
Description attachment
None
Processing Activity 1: Reconstruction
Software
CT Pro
Description
Media produced by this event on MorphoSource
Media 000477538: Anal Fin [CTImageSeries] [CT] (this media)