Media 000478728: Dufour's Gland
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

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Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000478728
Media type
Mesh
Object element or part
Dufour's gland
Object represented
Object taxonomy
Apis mellifera
Object organization
Side
--
Orientation
--
Short description
--
Full description
--
Creator
Fiorella Ramirez Esquivel
Date created
June 14, 2022
Date uploaded
November 01, 2022

FILE OBJECT DETAILS Field Definitions

File name
Dufour_s_gland_1_.stl
File format(s)
STL
File size
84.9 MB
Points
231982
Polygons
464108
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
0.554, 0.893, 0.413
Centroid coordinates
-1.498, -0.408, 2.378
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (5 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Custom Make µ-CT Scanner Assembled In-House Heliscan ANU3, National Laboratory for X-ray Micro Computed Tomography (Australian National University)

OWNERSHIP AND PERMISSIONS Field Definitions

Publication status
Open Download
Download reviewer
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
Office of Naval Research (USA) - N62909-20-1-2088
Publisher
UNSW Canberra
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UNSW:ENTO:5 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
National Laboratory for X-ray Micro Computed Tomography (Australian National University)
Creator
Levi Beeching
Event date
August 02, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
60kV
Power
80mA
Amperage
14.7mA
Surrounding material
plastic tube, air
X-ray tube type
--
Target type
Transmission
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
2.85mm
Source detector distance
338.188mm
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000478590: Stinger [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Levi Beeching
Event date
August 02, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000478590: Stinger [CTImageSeries] [CT] was processed with 5 activities to create derived Media 000478728: Dufour's Gland [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Fiorella Ramirez Esquivel
Event date
June 14, 2022
Software
--
Description
--
Description attachment
None

Processing Activity 1: Crop

Software
ImageJ
Description
Cropping and exporting NiFTI file

Processing Activity 2: Background Removal and/or Masking

Software
ITK-Snap
Description
Background labelling

Processing Activity 3: Reconstruction

Software
ITK-Snap
Description
Label and separate tissue types - User guided auto-segmentation (Classification)

Processing Activity 4: Reconstruction

Software
ITK-Snap
Description
Manual segmentation

Processing Activity 5: Reconstructed Tomography to Mesh

Software
ITK-Snap
Description
Export segmentation to mesh

Media produced by this event on MorphoSource

Media 000478728: Dufour's Gland [Mesh] [CT] (this media)