Media 000517846: Whole Fish Segmentation
Open Download
Type Other
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

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Project
ยท Public

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GENERAL DETAILS Field Definitions

Media ID
000517846
Media type
Other
Object element or part
whole fish segmentation
Object represented
Object taxonomy
Bothragonus occidentalis
Side
--
Orientation
--
Short description
OVert #04211
Full description
--
Creator
Cassandra Donatelli
Date created
--
Date uploaded
April 20, 2023

FILE OBJECT DETAILS Field Definitions

File name
OVert_04211-20230420T225240Z-001.zip
File format(s)
ZIP archive, PNG
File size
1.75 GB

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1173, Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF OVert grant DEB-1701665
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object uwfc:a:40591 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
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Flux normalization
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Pixel spacing calibration
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Shading correction
--
Frame averaging
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Projections
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Voltage
--
Power
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Amperage
--
Surrounding material
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X-ray tube type
--
Target type
--
Detector type
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Detector pixels X
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Detector pixels size X
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Detector pixels Y
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Detector pixels size Y
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Detector configuration
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Source object distance
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Source detector distance
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Target material
--
Rotation number
--
Phase contrast
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Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000517846: Whole Fish Segmentation [Other] [CT] (this media).

Processing Details Field Definitions

Creator
Cassandra Donatelli
Event date
--
Software
NRecon
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000517846: Whole Fish Segmentation [Other] [CT] (this media)