Media 000528477: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000528477: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
In Collections
Team
· Public
Project
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000528477
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
Object taxonomy
Turdus abyssinicus roehli
Object organization
Side
--
Orientation
--
Short description
zipped tiff stack
Full description
microCT volume and derivatives, fluid-preserved bird
Creator
Natale, Rossy
Date created
May 17, 2023
Date uploaded
May 31, 2023
FILE OBJECT DETAILS Field Definitions
File name
FMNH_B_356764_Turdus_ImageStack.zip
File format(s)
ZIP archive, TIFF
File size
166 MB
Image width
489
Image height
407
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.088308
Y pixel spacing
0.088308
Z pixel spacing
0.088308
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,773
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s, UChicago PaleoCT (University of Chicago)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Field Museum of Natural History
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF DBI-1701714; oVert TCN; NSF DBI-1702421
Publisher
--
Cite as
Field Museum of Natural History provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
FMNH:Birds:356764
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
UChicago PaleoCT (University of Chicago)
Creator
Magallanes, Isaac
Event date
May 17, 2023
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.25
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
3
Projections
850
Voltage
80
Power
0.0168
Amperage
210
Surrounding material
Air
X-ray tube type
240
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000528477: Whole Body [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
Natale, Rossy
Event date
May 17, 2023
Software
VGStudio Max 3.3.0
Description
calibrated histogram to highest and lowest densities, cropped ROI down to the specimen
Description attachment
None