Media 000562684: Host Tissue
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

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No tags found.

GENERAL DETAILS Field Definitions

Media ID
000562684
Media type
Mesh
Object element or part
Host tissue
Object represented
Object taxonomy
Shiinoa inauris
Side
--
Orientation
--
Short description
--
Full description
--
Creator
Goetz, Freya
Date created
August 23, 2023
Date uploaded
September 19, 2023

FILE OBJECT DETAILS Field Definitions

File name
FEG211018_191-USNM229107-S_inauris-host.ply
File format(s)
PLY
File size
259 MB
Points
3190726
Polygons
6321600
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
0.005, 0.005, 0.006
Centroid coordinates
0.003, 0.003, 0.003
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (2 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m, Micro-Computed Tomography Imaging Center (mCTIC) (National Museum of Natural History, Smithsonian Institution)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
--
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object USNM:IZ:USNM 229107 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Micro-Computed Tomography Imaging Center (mCTIC) (National Museum of Natural History, Smithsonian Institution)
Creator
Goetz, Freya
Event date
October 18, 2021
Software
datos
Description
--
Description Attachment
None
Photographic Reference
None
Filter
no
Exposure time
1000
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
1800
Voltage
70
Power
3.81
Amperage
230
Surrounding material
0.5% low melt agarose in 200ul pipet tip
X-ray tube type
GE Phoenix v|tome|x Nano Tube 180kV
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
diamond
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Processing Details Field Definitions

Creator
Goetz, Freya
Event date
October 18, 2021
Software
datos
Description
--
Description attachment
None

Processing Activity 1: Reconstruction

Software
datos
Description

STEP 3: IMAGE PROCESSING

Derived Media 000562678: Two Female Copepods Attached To Fish Nasal Lamellae Tissue And Two Copepod Males Attached To One Female [CTImageSeries] [CT] was processed with 1 activity to create derived Media 000562684: Host Tissue [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Goetz, Freya
Event date
August 23, 2023
Software
Dragonfly ORS (2022.2)
Description
--
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
Dragonfly ORS (2022.2)
Description

Media produced by this event on MorphoSource

Media 000562684: Host Tissue [Mesh] [CT] (this media)