Media 000633130: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000633130: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
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Project
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Project
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000633130
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
Object taxonomy
Atelopus chiriquiensis
Object organization
Side
--
Orientation
--
Short description
--
Full description
microCT volume, zipped 16-bit tiff stack. Data inverted following reconstruction.
Record created by batch submission.
Creator
Chandrashekar, Chirag
Date created
January 11, 2023
Date uploaded
May 30, 2024
FILE OBJECT DETAILS Field Definitions
File name
MVZ_HERP_171339_Atelopus_chiriquiensis.zip
File format(s)
ZIP archive, TIFF
File size
391 MB
Image width
658
Image height
1334
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.057924
Y pixel spacing
0.057924
Z pixel spacing
0.057924
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
294
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
0
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 520 Versa X-ray Microscope (XRM), Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Museum of Vertebrate Zoology, UC Berkeley
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
oVert TCN partner NSF DBI-1701714; oMeso PEN NSF DBI-2001474
Publisher
Museum of Vertebrate Zoology, UC Berkeley
Cite as
MVZ (catalog number)
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
MVZ:Herp:MVZ:Herp:171339
was imaged to create
this media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)
Creator
--
Event date
January 11, 2023
Software
Scout-and-Scan Control System
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.699999988079071
Flux normalization
--
Pixel spacing calibration
Geometry
Shading correction
--
Frame averaging
--
Projections
1601
Voltage
150
Power
0.01
Amperage
66.6666666666666
Surrounding material
--
X-ray tube type
--
Target type
Transmission
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
Area (single or tiled detector)
Source object distance
--
Source detector distance
--
Target material
tungsten
Rotation number
--
Phase contrast
--
Optical magnification
true
Acquisition type
Sequenced