Media 000603705: 2nd Cervical Vertebra (Axis)
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

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GENERAL DETAILS Field Definitions

Media ID
000603705
Media type
Mesh
Object element or part
2nd cervical vertebra (axis)
Object represented
Object taxonomy
Masiakasaurus knopfleri
Side
Midline
Orientation
--
Short description
2nd cervical vertebra (axis)
Full description
--
Creator
McDiarmid, Fisher
Date created
January 18, 2024
Date uploaded
February 09, 2024

FILE OBJECT DETAILS Field Definitions

File name
FMNH_PR_2466.ply
File format(s)
PLY
File size
152 MB
Points
2000937
Polygons
4010191
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
22.264, 30.487, 33.455
Centroid coordinates
27.112, 27.592, 24.131
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric eXplore CT 120 in vivo, Ohio University MicroCT Facility (Ohio University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
IP holder
Field Museum of Natural History
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF EAR_9418817; Ohio University Heritage College of Osteopathic Medicine; NSF EAR_1123642; NSF DBI_2242718; NSF EAR_1525915
Publisher
O'Connor, Patrick; Mahajanga Basin Project
Cite as
Patrick M. O'Connor and colleagues provided access to these data. Data collection and processing funded by the US NSF EAR_9418816, NSF EAR_1123642, NSF EAR_1525915, NSF DBI_2242717 and Ohio University Heritage College of Osteopathic Medicine. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object FMNH:PR:2466 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Ohio University MicroCT Facility (Ohio University)
Creator
Ridgely, Ryan; Witmer, Larry
Event date
December 15, 2023
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
20ms
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
4
Projections
--
Voltage
120kV
Power
--
Amperage
32mA
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000603658: 2nd Cervical Vertebra (Axis) [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
McDiarmid, Fisher
Event date
January 18, 2024
Software
Avizo
Description
Cropping and output as dicoms to replace field number(s) with museum accession number.
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000603658: 2nd Cervical Vertebra (Axis) [CTImageSeries] [CT] was processed to create derived Media 000603705: 2nd Cervical Vertebra (Axis) [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
McDiarmid, Fisher
Event date
January 18, 2024
Software
Avizo
Description
Cropping and output as dicoms to replace field number(s) with museum accession number.
Description attachment
None

Media produced by this event on MorphoSource

Media 000603705: 2nd Cervical Vertebra (Axis) [Mesh] [CT] (this media)