Media 000548541: Femur
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
UF:Herp:172560 Rhinella marina
Managed by
Diana Fusco

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Related Media (13)

Media produced from the same original imaging that created Media 000548541 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000548541 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Open Download

Other Related Media (12)

Other media associated with the original imaging that produced Media 000548541 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
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Mesh
· Open Download
Mesh
· Open Download
Mesh
· Open Download
Mesh
· Open Download
Mesh
· Open Download
Mesh
· Open Download
Mesh
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Mesh
· Open Download
Mesh
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GENERAL DETAILS Field Definitions

Media ID
000548541
Media type
Mesh
Object element or part
Femur
Object represented
UF:Herp:172560
Object taxonomy
Rhinella marina
Object organization
FLMNH Division of Herpetology
Side
Left
Orientation
--
Short description
Left femur of Rhinella marina
Full description
--
Creator
Fusco, Diana
Date created
August 01, 2023
Date uploaded
August 13, 2023

FILE OBJECT DETAILS Field Definitions

File name
UF_herp_172560_Rhinella_marina_femur_L_ct.ply
File format(s)
PLY
File size
3.62 MB
Points
105459
Polygons
194742
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
29.121, 6.655, 18.820
Centroid coordinates
23.010, 21.209, 80.339
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (1 step)
Derived directly from
Media 000048861: Element Unspecified [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Diana Fusco
Data uploaded by
Diana Fusco
Publication status
Open Download
Download reviewer
David Blackburn ; Digital Imaging Florida Museum
IP holder
Florida Museum of Natural History, University of Florida
Copyright statement
 No Known Copyright
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
CABAH
Publisher
Ozboneviz
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
Agreement File

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/548541
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UF:Herp:172560 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.200098
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
3
Projections
1800
Voltage
100
Power
0.02
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000048861: Element Unspecified [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000048861: Element Unspecified [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000048861: Element Unspecified [CTImageSeries] [Etc] was processed with 1 activity to create derived Media 000548541: Femur [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Fusco, Diana
Event date
August 01, 2023
Software
--
Description
Segmentation
Description attachment
None

Processing Activity 1: Simplification

Software
Geomagic Wrap
Description
Remove spikes

Media produced by this event on MorphoSource

Media 000548541: Femur [Mesh] [CT] (this media)