Media 000065300: Whole Body
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
MVZ:Mamm:MVZ:Mamm:32885 Ornithorhynchus Blumenbach Ornithorhynchus anatinus
Managed by
Carol Spencer

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Related Media (2)

Media produced from the same original imaging that created Media 000065300 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000065300 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

Other Related Media (1)

Other media associated with the original imaging that produced Media 000065300 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
· Restricted Download

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GENERAL DETAILS Field Definitions

Media ID
000065300
Media type
Mesh
Object element or part
Whole body
Object represented
MVZ:Mamm:MVZ:Mamm:32885
Object taxonomy
Ornithorhynchus Blumenbach Ornithorhynchus anatinus
Object organization
Museum of Vertebrate Zoology (MVZ) Mammal Collection (Arctos)
Side
--
Orientation
--
Short description
Mesh file (STL)
Full description
Migrated MorphoSource 1 Media File Title: Mesh file (STL) Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives
Creator
--
Date created
--
Date uploaded
December 08, 2018

FILE OBJECT DETAILS Field Definitions

File name
MVZ-M-32885-small.stl
File format(s)
STL
File size
95 MB
Points
957705
Polygons
1985842
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
106.221, 116.476, 287.458
Centroid coordinates
-24.092, -2.923, 78.081
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000065299: Whole Body [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Carol Spencer
Data uploaded by
Edward Stanley
Publication status
Restricted Download
Download reviewer
Carla Cicero; Museum of Vertebrate Zoology; Carol Spencer; Chris Conroy
IP holder
Museum of Vertebrate Zoology, UC Berkeley
Copyright statement
 In Copyright - Non-Commercial Use Permitted
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1702442; oVert TCN; NSF DBI-1701714
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Museum of Vertebrate Zoology provided access to these dataoriginally appearing in , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
 https://mvz.berkeley.edu/mvzdata_terms/

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M65300
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object MVZ:Mamm:MVZ:Mamm:32885 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.333096
Flux normalization
Yes
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
2000
Voltage
100
Power
0.025
Amperage
250
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000065299: Whole Body [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000065299: Whole Body [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000065299: Whole Body [CTImageSeries] [Etc] was processed to create derived Media 000065300: Whole Body [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000065300: Whole Body [Mesh] [Etc] (this media)