Media 000080181: Calcaneus
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
AMNH:Mammals:M-28252 Pongo pygmaeus pygmaeus
Managed by
AMNH Mammalogy Department

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Media Display

Related Media (1)

Media produced from the same original imaging that created Media 000080181 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000080181 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

In Collections

Team
· Public
Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000080181
Media type
Mesh
Object element or part
Calcaneus
Object represented
AMNH:Mammals:M-28252
Object taxonomy
Pongo pygmaeus pygmaeus
Object organization
AMNH Mammal Collections
Side
Left
Orientation
--
Short description
Smooth Surface Mesh
Full description
Migrated MorphoSource 1 Media File Title: Smooth Surface Mesh Migrated MorphoSource 1 Media Group Title: microCT Volume and Derivative Mesh File Migrated MorphoSource 1 Media File Description: correct chirality Migrated MorphoSource 1 Media Group Description: Correct chirality
Creator
--
Date created
--
Date uploaded
June 11, 2019

FILE OBJECT DETAILS Field Definitions

File name
Aguilar_AMNH_28252_L_Calc2.smooth.ply
File format(s)
PLY
File size
408 MB
Points
5250706
Polygons
10503614
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
29.493, 31.060, 58.648
Centroid coordinates
18.446, 17.193, 35.914
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000080180: Calcaneus [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
AMNH Mammalogy Department
Data uploaded by
Eleanor Virkler
Publication status
Restricted Download
Download reviewer
Neil Duncan
IP holder
AMNH Dept of Mammalogy
Copyright statement
 Copyright Undetermined
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1317525 (to DM Boyer and ER Seiffert), 1552848 (to DM Boyer) and Duke University Trinity College of Arts and Sciences
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Doug Boyer provided access to these data NSF BCS 1317525 (to DM Boyer and ER Seiffert), 1552848 (to DM Boyer) and Duke University Trinity College of Arts and Sciences. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M80181
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object AMNH:Mammals:M-28252 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
Mackenzie Shepard, Eleanor Virkler
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
2000
Voltage
158
Power
0.016432
Amperage
104
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000080180: Calcaneus [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Mackenzie Shepard, Eleanor Virkler
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000080180: Calcaneus [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000080180: Calcaneus [CTImageSeries] [Etc] was processed to create derived Media 000080181: Calcaneus [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Mackenzie Shepard, Eleanor Virkler
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000080181: Calcaneus [Mesh] [Etc] (this media)