Media 000154306: M Pp3
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
AMNH:Mammals:M-54355 Gorilla gorilla gorilla
Managed by
AMNH Mammalogy Department

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Related Media (0)

Media produced from the same original imaging that created Media 000154306 (this media). Includes all media associated with this media through an imaging and processing workflow.

No related media found.

In Collections

Team
· Public
Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000154306
Media type
Mesh
Object element or part
mPP3
Object represented
AMNH:Mammals:M-54355
Object taxonomy
Gorilla gorilla gorilla
Object organization
AMNH Mammal Collections
Side
Right
Orientation
--
Short description
mPP3
Full description
Migrated MorphoSource 1 Media File Title: mPP3 Migrated MorphoSource 1 Media Group Title: Raw image data Migrated MorphoSource 1 Media Group Description: Any 3D surface uploaded for this specimen/element was produced with either the Isosurface or LabelField functions in AMIRA v.5.6 or later, and is best regarded as minimally processed for smoothing and hole filling (unless otherwise noted). If raw image data (i.e., slices) for this specimen/element have been uploaded, they may appear as a single 3D Tiff format file produced in AMIRA v.5.6 or later. This file can be opened in most versions of AMIRA or AVIZO without needing additional input for scale (i.e., the voxel resolution is recognized). This file can also be opened in ImageJ but will require the user to scale the images with provided information on voxel dimensions prior to working with them.
Creator
--
Date created
--
Date uploaded
August 05, 2020

FILE OBJECT DETAILS Field Definitions

File name
Gorilla-gorilla-gorilla-M-AMNH-54355-mPP3-R_cleaned.ply
File format(s)
PLY
File size
4.53 MB
Points
124996
Polygons
249988
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
22.694, 20.814, 67.293
Centroid coordinates
-24.638, 0.987, -61.981
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix nanotom m, Molecular Imaging Center (University of Southern California)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
AMNH Mammalogy Department
Data uploaded by
Biren Patel
Publication status
Restricted Download
Download reviewer
Neil Duncan
IP holder
AMNH Dept of Mammalogy
Copyright statement
 Copyright Undetermined
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
National Science Foundation [BCS 1317047 (to Biren Patel), BCS 1539741 (to Caley Orr)], the L.S.B. Leakey Foundation (to Biren Patel), the Wenner-Gren Foundation (to Caley Orr), and the University of Southern California (to Biren Patel).
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Biren Patel provided access to these data. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M154306
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object AMNH:Mammals:M-54355 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Molecular Imaging Center (University of Southern California)
Creator
--
Event date
March 11, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000154306: M Pp3 [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
March 11, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000154306: M Pp3 [Mesh] [CT] (this media)