Media 000074065: Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
MVZ:Herp:MVZ:Herp:170631 Hydromantes wintu
Managed by
Carol Spencer

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Media produced from the same original imaging that created Media 000074065 (this media). Includes all media associated with this media through an imaging and processing workflow.

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GENERAL DETAILS Field Definitions

Media ID
000074065
Media type
Volumetric Image Series
Object element or part
body
Object represented
MVZ:Herp:MVZ:Herp:170631
Object taxonomy
Hydromantes wintu
Object organization
Museum of Vertebrate Zoology (MVZ) Herp Collection (Arctos)
Side
--
Orientation
--
Short description
zipped tiff stack
Full description
Migrated MorphoSource 1 Media File Title: zipped tiff stack Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives
Creator
--
Date created
--
Date uploaded
April 09, 2019

FILE OBJECT DETAILS Field Definitions

File name
MVZ-H-MVZ-Herp-170631-body.zip
File format(s)
ZIP archive, TIFF
File size
51 MB
Image width
567
Image height
549
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.051648
Y pixel spacing
0.051648
Z pixel spacing
0.051648
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,890

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Carol Spencer
Data uploaded by
Edward Stanley
Publication status
Restricted Download
Download reviewer
Carol Spencer; Museum of Vertebrate Zoology; Carla Cicero
IP holder
Museum of Vertebrate Zoology, UC Berkeley
Copyright statement
 In Copyright - Educational Use Permitted
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1702263; NSF DBI-1701714; oVert TCN
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: University of California-Berkeley provided access to these data provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
 https://mvz.berkeley.edu/mvzdata_terms/

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M74065
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object MVZ:Herp:MVZ:Herp:170631 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.200098
Flux normalization
Yes
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
1200
Voltage
80
Power
0.016
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000074065: Body [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000074065: Body [CTImageSeries] [Etc] (this media)