Media 000081343: Otolith
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000081343
Media type
Mesh
Object element or part
otolith
Object represented
Object taxonomy
Cypselurus melanurus
Side
--
Orientation
--
Short description
3D Mesh file (STL)
Full description
Migrated MorphoSource 1 Media File Title: 3D Mesh file (STL) Migrated MorphoSource 1 Media Group Title: microCT volume and derivatives
Creator
--
Date created
--
Date uploaded
June 18, 2019

FILE OBJECT DETAILS Field Definitions

File name
Otolith.stl
File format(s)
STL
File size
2.13 MB
Points
5663
Polygons
11324
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
2.853, 3.302, 5.637
Centroid coordinates
-4.141, -0.211, -12.527
Units of point coordinates
Millimeters

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Open Download
IP holder
Florida Museum of Natural History, University of Florida
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
oVert TCN; NSF DBI-1701714
Publisher
--
Cite as
Blackburn, D.C., et al. 2024. Increasing the impact of vertebrate scientific collections through 3D-imaging: the openVertebrate (oVert) Thematic Collections Network. BioScience 74: 169–186. https://doi.org/10.1093/biosci/biad120; Migrated MorphoSource 1 Media Citation Instructions: University of Florida provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UF:Fish:111151 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Zachary Randall
Event date
--
Software
--
Description
--
Description Attachment
None
Photographic Reference
None
Filter
--
Exposure time
0.200098
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
1440
Voltage
100
Power
0.02
Amperage
200
Surrounding material
None
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000081254: Head [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Zachary Randall
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000081254: Head [CTImageSeries] [Etc] was processed to create derived Media 000081343: Otolith [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Zachary Randall
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000081343: Otolith [Mesh] [Etc] (this media)