Media 000120674: Whole Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
AMNH:Herpetology:A-106749 Arenophryne rotunda
Managed by
American Museum of Natural History

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Media Display

Related Media (4)

Media produced from the same original imaging that created Media 000120674 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000120674 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
· Restricted Download

Other Related Media (3)

Other media associated with the original imaging that produced Media 000120674 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
· Restricted Download
Mesh
· Restricted Download
Mesh
· Restricted Download

In Collections

Project
· Public
Team
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000120674
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
AMNH:Herpetology:A-106749
Object taxonomy
Arenophryne rotunda
Object organization
AMNH Herpetology Collections
Side
--
Orientation
--
Short description
Tomogram Stack (16 bit tiffs)
Full description
Migrated MorphoSource 1 Media File Title: Tomogram Stack (16 bit tiffs) Migrated MorphoSource 1 Media Group Title: CT scan of AMNH106749 Arenophryne rotunda
Creator
--
Date created
--
Date uploaded
June 20, 2020

FILE OBJECT DETAILS Field Definitions

File name
AMNH-A106749.zip
File format(s)
ZIP archive, TIFF
File size
1010 MB
Image width
448
Image height
1065
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.019220
Y pixel spacing
0.019220
Z pixel spacing
0.019220
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,412

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000100591: Whole Body [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
American Museum of Natural History
Data uploaded by
Edward Stanley
Publication status
Restricted Download
Download reviewer
American Museum of Natural History; Frank Burbrink
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M120674
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object AMNH:Herpetology:A-106749 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Ed Stanley
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
2000
Voltage
70
Power
0.014
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000100591: Whole Body [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Ed Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000100591: Whole Body [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000100591: Whole Body [CTImageSeries] [Etc] was processed to create derived Media 000120674: Whole Body [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Ed Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000120674: Whole Body [CTImageSeries] [Etc] (this media)