Media 000116281: Brain Endocast
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Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
USNM:BIRDS:USNM 343978 Ardea cinerea cinerea
Managed by
Chris Milensky

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Related Media (2)

Media produced from the same original imaging that created Media 000116281 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000116281 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
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Other Related Media (1)

Other media associated with the original imaging that produced Media 000116281 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
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GENERAL DETAILS Field Definitions

Media ID
000116281
Media type
Mesh
Object element or part
brain endocast
Object represented
USNM:BIRDS:USNM 343978
Object taxonomy
Ardea cinerea cinerea
Object organization
NMNH - Division of Birds
Side
NotApplicable
Orientation
--
Short description
Brain endocast STL
Full description
Migrated MorphoSource 1 Media File Title: Brain endocast STL Migrated MorphoSource 1 Media Group Title: STL
Creator
--
Date created
--
Date uploaded
May 20, 2020

FILE OBJECT DETAILS Field Definitions

File name
Ardea-cinerea-USNM-Birds-343978-endocast.stl
File format(s)
STL
File size
28.6 MB
Points
299841
Polygons
599663
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
29.155, 23.278, 36.122
Centroid coordinates
20.694, 30.540, 156.438
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000116251: Skull [CTImageSeries] [Etc]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric eXplore CT 120 in vivo, Ohio University MicroCT Facility (Ohio University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Chris Milensky
Data uploaded by
Catherine Early
Publication status
Restricted Download
Download reviewer
Chris Milensky; Catherine Early
IP holder
Smithsonian Institution, National Museum of Natural History
Copyright statement
 In Copyright - Non-Commercial Use Permitted
Creative Commons license
 Creative Commons BY-NC-SA Attribution-NonCommercial-ShareAlike 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF Graduate Research Fellowship to C. M. Early (DGE-1060934, DGE-1645419); American Museum of Natural History Chapman Ornithology Grant to C. M. Early; NSF grants to L. M. Witmer (IOB-0517257, IOS-1050154, IOS-1456503)
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: C. M. Early, A. N. Iwaniuk, R. C. Ridgely, and L. M. Witmer provided access to these dataoriginally appearing in Early et al., 2020, the generation of which was funded by an NSF Graduate Research Fellowship to C. M. Early (DGE-1060934, DGE-1645419), American Museum of Natural History Chapman Ornithology Grant to C. M. Early, and NSF grants to L. M. Witmer (IOB-0517257, IOS-1050154, IOS-1456503). The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
--
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M116281
MorphoSource DOI
 doi:10.17602/M2/M116281
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object USNM:BIRDS:USNM 343978 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Ohio University MicroCT Facility (Ohio University)
Creator
Ryan Ridgely
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
20000
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
2
Projections
3600
Voltage
120
Power
--
Amperage
32000
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000116251: Skull [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Ryan Ridgely
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000116251: Skull [CTImageSeries] [Etc]

STEP 3: IMAGE PROCESSING

Derived Media 000116251: Skull [CTImageSeries] [Etc] was processed to create derived Media 000116281: Brain Endocast [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Ryan Ridgely
Event date
February 23, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000116281: Brain Endocast [Mesh] [CT] (this media)