Media 000391921: Skeleton
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
mna:v:12442 Navajosphenodon sani
Managed by
Christina Byrd

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Related Media (18)

Media produced from the same original imaging that created Media 000391921 (this media). Includes all media associated with this media through an imaging and processing workflow.

Child Media (18)

Derived media that were created from processing Media 000391921 (this media). The media immediately below this media in the imaging and processing workflow.

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TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000391921
Media type
Volumetric Image Series
Object element or part
skeleton
Object represented
mna:v:12442
Object taxonomy
Navajosphenodon sani
Object organization
Museum of Northern Arizona
Side
--
Orientation
--
Short description
CT image stack (TIFF) of the whole skeleton of MNA.V.12442
Full description
CT image stack (TIFF) of the whole skeleton of MNA.V.12442. This specimen was previously cataloged as MCZ VPRA-9016. This specimen was transferred to the MNA after it was designated a holotype, per interinstitutional agreements.
Creator
Tiago Simoes
Date created
August 15, 2019
Date uploaded
October 19, 2021

FILE OBJECT DETAILS Field Definitions

File name
MNA.V.12442_Navajosphenodon_sani_wholeSkeleton_CT.zip
File format(s)
ZIP archive, TIFF
File size
1.88 GB
Image width
1316
Image height
686
Color space
BlackIsZero
Color depth
16
Compression
--
Series type
Reconstructed image stack
X pixel spacing
0.200000
Y pixel spacing
0.200000
Z pixel spacing
0.200000
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,998

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (1 step)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology HMX ST 225, Center for Nanoscale Systems (Harvard University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Christina Byrd
Data uploaded by
Christina Byrd
Publication status
Restricted Download
Download reviewer
Christina Byrd
IP holder
Museum of Northern Arizona
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC-ND Attribution-NonCommercial-NoDerivs 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/391921
MorphoSource DOI
 10.17602/M2/M391921
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object mna:v:12442 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
Center for Nanoscale Systems (Harvard University)
Creator
Tiago Simoes
Event date
August 15, 2019
Software
--
Description
CT TIFFs of full specimen
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
708
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
--
Projections
3142
Voltage
90
Power
14490
Amperage
161
Surrounding material
--
X-ray tube type
--
Target type
Reflection
Detector type
--
Detector pixels X
--
Detector pixels size X
.2
Detector pixels Y
--
Detector pixels size Y
.2
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 1 activity to create derived Media 000391921: Skeleton [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Tiago Simoes
Event date
August 15, 2019
Software
VGStudio MAX CT Reconstruction Module
Description
--
Description attachment
None

Processing Activity 1: Reconstruction

Software
Description

Media produced by this event on MorphoSource

Media 000391921: Skeleton [CTImageSeries] [CT] (this media)