Media 000636253: Petrosal
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
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· Public

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GENERAL DETAILS Field Definitions

Media ID
000636253
Media type
Volumetric Image Series
Object element or part
Petrosal
Object represented
Object taxonomy
Morganucodon watsoni
Side
--
Orientation
--
Short description
HRXCT scan -- petrosal
Full description
University of Texas High-Resolution X-ray CT Facility Archive 3180 Sipla: 21105A: Scans of a petrosal of Morganucodon watsoni (M21105; fissure fill deposits, Hettangian – Sinemurian, Jurassic; Pant Quarry, South Glamorgan, Wales; coll. K.A. Kermack, 1955; NHM Earth Sciences Dept.) for Justin Sipla of the University of Iowa. Specimen scanned by Jessie Maisano 16 December 2013. scan parameters: Xradia. 4X objective, 90kV, 10W, 1.1s acquisition time, detector 17.2 mm, source -37 mm, XYZ [-333, 17381, 87], camera bin 2, angles ±180, 1261 views, 0.7 mm SiO2 filter, dithering. End reference (45 frames, each for 1.1s). Reconstructed with center shift 1.5, beam hardening 2.1, theta 0, byte scaling [-10, 220], binning 1, recon filter smooth (kernel size = 0.6). Total slices = 948. 21105A.rcp: Xradia recipe with scan parameters. 16bit: 16bit TIFF images reconstructed by Xradia Reconstructor. Voxels are 4.60 microns.
Creator
Jessie Maisano
Date created
December 16, 2013
Date uploaded
June 10, 2024

FILE OBJECT DETAILS Field Definitions

File name
File format(s)
ZIP archive, TIFF
File size
734 MB
Image width
754
Image height
583
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.004600
Y pixel spacing
0.004600
Z pixel spacing
0.004600
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
948

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
0 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia microXCT-400, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Open Download
IP holder
Natural History Museum (NHMUK)
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
DBI-1902242
Publisher
oUTCT PEN
Cite as
Data acquired for Justin Sipla. Data upload to MorphoSource was funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
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IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object nhmuk:pv m:21105 was imaged to create this media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Jessie Maisano
Event date
December 16, 2013
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
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Flux normalization
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Pixel spacing calibration
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Shading correction
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Frame averaging
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Projections
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Voltage
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X-ray tube type
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Detector pixels X
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Detector pixels size X
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Detector pixels Y
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Detector pixels size Y
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Source detector distance
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Rotation number
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Phase contrast
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Media produced by this event on MorphoSource

Media 000636253: Petrosal [CTImageSeries] [CT] (this media)