Media 000652416: Partial Skull
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
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Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000652416
Media type
Volumetric Image Series
Object element or part
partial skull
Object represented
Object taxonomy
Amphisbaenian sp.
Side
--
Orientation
--
Short description
HRXCT scan of partial skull
Full description
University of Texas High-Resolution X-ray CT Facility Archive 2674 Stocker: 243A: Scans of a partial amphisbaenian skull (TMM 41672-243; Purple Bench, locality 8; Collected by C. Kirk) for Michelle Stocker of UT DOGS. Specimen scanned by Jessie Maisano 30 January 2012. scan parameters: Xradia. 0.5X objective, 80kV, 10W, 2s acquisition time, detector 165 mm, source -69.5 mm, camera bin 2, angles ±100, 801 views, 1 mm CaF2 filter, dithering, no sample drift correction. End reference (45 frames, each for 2s). Crop-and-fill plugin applied. Reconstructed with center shift -9.5, beam hardening 0.15, theta -63, byte scaling [-10, 100], binning 1, recon filter smooth (kernel size = 0.8). Total slices = 870. 243A.rcp: Xradia recipe with scan parameters. 16bit: 16bit TIFF images reconstructed by Xradia Reconstructor. Voxels are 16.74 microns.
Creator
Jessie Maisano
Date created
January 30, 2012
Date uploaded
July 25, 2024

FILE OBJECT DETAILS Field Definitions

File name
File format(s)
ZIP archive, TIFF
File size
766 MB
Image width
773
Image height
667
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
16.740000
Y pixel spacing
16.740000
Z pixel spacing
16.740000
Pixel spacing units
Um
Slice thickness
--
Number of images in set
870

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia microXCT-400, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
University of Texas Vertebrate Paleontology Collections
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
DBI-1902242
Publisher
oUTCT PEN
Cite as
These data were made available by Michelle Stocker. Data upload to MorphoSource was funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
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External media URL
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IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object txvp:vpl:41672-243 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
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Event date
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Software
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Description
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Description attachment
None
Reference attachment
None
Filter
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Exposure time
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Flux normalization
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Pixel spacing calibration
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Shading correction
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Frame averaging
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Projections
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Voltage
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Power
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Amperage
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Surrounding material
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X-ray tube type
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Target type
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Detector type
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Detector pixels X
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Detector pixels size X
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Detector pixels Y
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Detector pixels size Y
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Detector configuration
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Source object distance
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Source detector distance
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Target material
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Rotation number
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Phase contrast
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Optical magnification
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Acquisition type
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STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000652416: Partial Skull [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000652416: Partial Skull [CTImageSeries] [CT] (this media)