Media 000652421: Partial Skull
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000652421: Partial Skull
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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GENERAL DETAILS Field Definitions
Media ID
000652421
Media type
Volumetric Image Series
Object element or part
partial skull
Object represented
Object taxonomy
Amphisbaenian sp.
Object organization
Side
--
Orientation
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Short description
HRXCT scan of partial skull
Full description
University of Texas High-Resolution X-ray CT Facility Archive 2683
Stocker:
244A: Scans of a partial amphisbaenian skull (TMM 41672-244; Purple Bench, locality 8; Collected by C. Kirk) for Michelle Stocker of UT DOGS. Specimen scanned by Jessie Maisano 30 January 2012.
scan parameters: Xradia. 0.5X objective, 80kV, 10W, 2s acquisition time, detector 185 mm, source -39.5 mm, camera bin 2, angles ±100, 801 views, 1 mm CaF2 filter, dithering, no sample drift correction. End reference (45 frames, each for 2s). Crop-and-fill plugin applied. Reconstructed with center shift -10.5, beam hardening 0.15, theta -86, byte scaling [-10, 80], binning 1, recon filter smooth (kernel size = 0.8). Total slices = 812.
244A.rcp: Xradia recipe with scan parameters.
16bit: 16bit TIFF images reconstructed by Xradia Reconstructor. Voxels are 9.94 microns.
Creator
Jessie Maisano
Date created
January 30, 2012
Date uploaded
July 25, 2024
FILE OBJECT DETAILS Field Definitions
File name
16bit.zip
File format(s)
ZIP archive, TIFF
File size
905 MB
Image width
885
Image height
781
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
9.940000
Y pixel spacing
9.940000
Z pixel spacing
9.940000
Pixel spacing units
Um
Slice thickness
--
Number of images in set
812
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia microXCT-400, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
University of Texas Vertebrate Paleontology Collections
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
DBI-1902242
Publisher
oUTCT PEN
Cite as
These data were made available by Michelle Stocker. Data upload to MorphoSource was funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
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IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
tmm:vpl:41672-244
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
--
Event date
--
Software
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Description
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Description attachment
None
Reference attachment
None
Filter
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Exposure time
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Flux normalization
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Pixel spacing calibration
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Shading correction
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Frame averaging
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Projections
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Voltage
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Power
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Amperage
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Surrounding material
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X-ray tube type
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Target type
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Detector type
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Detector pixels X
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Detector pixels size X
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Detector pixels Y
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Detector pixels size Y
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Detector configuration
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Source object distance
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Source detector distance
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Target material
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Rotation number
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Phase contrast
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Optical magnification
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Acquisition type
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STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000652421: Partial Skull [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
Media 000652421: Partial Skull [CTImageSeries] [CT] (this media)