Media 000412859: Whole Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
FMNH:Amphibians and Reptiles:178534 Gerrhopilus mirus
Managed by
Sharon Grant

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Related Media (2)

Media produced from the same original imaging that created Media 000412859 (this media). Includes all media associated with this media through an imaging and processing workflow.

Child Media (2)

Derived media that were created from processing Media 000412859 (this media). The media immediately below this media in the imaging and processing workflow.

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Mesh
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GENERAL DETAILS Field Definitions

Media ID
000412859
Media type
Volumetric Image Series
Object element or part
whole-body
Object represented
FMNH:Amphibians and Reptiles:178534
Object taxonomy
Gerrhopilus mirus
Object organization
Field Museum of Natural History (Zoology) Amphibian and Reptile Collection
Side
--
Orientation
--
Short description
--
Full description
--
Creator
Jaimi Gray
Date created
December 22, 2021
Date uploaded
January 12, 2022

FILE OBJECT DETAILS Field Definitions

File name
FMNH-R-178534-body.zip
File format(s)
ZIP archive, TIFF
File size
464 MB
Image width
444
Image height
374
Color space
BlackIsZero
Color depth
16
Compression
PackBits
Series type
Reconstructed image stack
X pixel spacing
0.015182
Y pixel spacing
0.015182
Z pixel spacing
0.015182
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
7,910

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 620 Versa x-ray microscope (xrm), UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Sharon Grant
Data uploaded by
Jaimi Gray
Publication status
Restricted Download
Download reviewer
Janeen Jones; Stephanie Baumgart; Kate Webbink; Joshua Mata
IP holder
--
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF DBI-1701714 ("oVert: TCN" parent grant)
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
 https://www.fieldmuseum.org/science/research/use-collections-data-and-images

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/412859
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object FMNH:Amphibians and Reptiles:178534 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Jaimi Gray
Event date
December 22, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000412859: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi Gray
Event date
December 22, 2021
Software
GE Reconstruction Software and VG Studio Max
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000412859: Whole Body [CTImageSeries] [CT] (this media)