Media 000529478: Entire Specimen
Open Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000529478: Entire Specimen
Open Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
In Collections
No collections found.
TAGS
GENERAL DETAILS Field Definitions
Media ID
000529478
Media type
Volumetric Image Series
Object element or part
Entire specimen
Object represented
Object taxonomy
Chiromantis rufescens
Object organization
Side
--
Orientation
--
Short description
--
Full description
DICE-CT scan, specimen stained in 1.25% buffered Lugol's for 13 days. SVL 45.99mm, body weight 4.8g.
Creator
Leavey, Alice
Date created
February 07, 2023
Date uploaded
June 06, 2023
FILE OBJECT DETAILS Field Definitions
File name
Chiromantis rufescens UF-herp-186105.zip
File format(s)
ZIP archive, TIFF
File size
10.2 GB
Image width
1715
Image height
1304
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.022417
Y pixel spacing
0.022417
Z pixel spacing
0.022417
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
3,911
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
Florida Museum of Natural History, University of Florida
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
UF:Herp:186105
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Leavey, Alice
Event date
February 07, 2023
Software
Phoenix DatosX|A
Description
TIF image stack
Description attachment
None
Reference attachment
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
2200
Voltage
110
Power
--
Amperage
200
Surrounding material
Air/foam
X-ray tube type
--
Target type
Reflection
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
Area (single or tiled detector)
Source object distance
--
Source detector distance
--
Target material
Tungsten (W)
Rotation number
--
Phase contrast
No
Optical magnification
No
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000529478: Entire Specimen [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
Leavey, Alice
Event date
February 07, 2023
Software
VGStudio Max (Version 3.4)
Description
--
Description attachment
Media produced by this event on MorphoSource
Media 000529478: Entire Specimen [CTImageSeries] [CT] (this media)